PARSEC - PAtteRn SEarch / Context
This is the web app or web related tool named PARSEC - PAtteRn SEarch / Context whose latest release can be downloaded as PARSEC_Deployment_Package_v2.zip from this website redcoolmedia.net
SCREENSHOTS:
PARSEC - PAtteRn SEarch / Context
APP DESCRIPTION:
Download this app named PARSEC - PAtteRn SEarch / Context.
The characterization of genomic sites is a major challenge in the understanding and exploitation of next generation sequencing data. Most genomic sites are represented by short, degenerated motifs with a scattered distribution and sometimes with biological function (ex: regulation of gene expression, splicing patterns or epigenetics signals). These motifs are associated with a huge amount of noise and thus, the development of a computational platform for accurate detection of genomic sites requires the integration of various large-scale biological data in order to filter out false positives.PARSEC represents an intuitive, modular (easily extensible) and all-in-one solution for the efficient integration of lots of diverse genomic information in order to perform nonlinear localization and characterization of biological sites in a user-friendly environment.
See the wiki for hardware requirements and supported browsers.
Audience
Science/Research
User interface
Web-based
Programming Language
C++, Java
Database Environment
JDBC, MySQL, PostgreSQL (pgsql)
Free download Web app or web tool PARSEC - PAtteRn SEarch / Context from RedcoolMedia.net