MiModD

SCREENSHOTS:

MiModD

APP DESCRIPTION:

Download this app named MiModD.

MiModD is a software package for genomic variant identification from next-generation sequencing (NGS) data with optimized usage of system resources and a user-friendly interface. For most model organism genomes it lets the user carry out a complete analysis from unaligned genomic NGS read data to an annotated list of variants on a regular Desktop PC within a few hours. Its user-interface is beginner-friendly and designed to encourage geneticists to analyze NGS data themselves without the help of a trained bioinformatician.

Features

• WGS analysis of model organism genomes even on single PCs and notebooks
• powerful tools for variant filtering and mapping
• integration into an existing Galaxy installation with a single command
• example datasets for testing
• online tutorial and extensive documentation
• platform-specific bundled distributions (many Linux flavours, OS X) to run and test in a pre-configured Galaxy instance without installation

Audience

Science/Research, Advanced End Users

User interface

Web-based, Command-line

Programming Language

Python

Free download Web app or web tool MiModD from RedcoolMedia.net