SW#

This is the web app or web related tool named SW# whose latest release can be downloaded as swsharp-src.zip from this website redcoolmedia.net

SW#

Download this app named SW#.

SW# (swsharp) is a library for sequence alignment based on CUDA enabled GPUs. It utilizes Hirschbergs and Ukkonens algorithm for memory efficiency and additional speed up. The library is scalable for use with multiple GPUs. Some parts of the library utilize MPI for CUDA enabled clusters.

This work has been supported in part by Croatian Science Foundation under the project UIP-11-2013-7353.

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Publications:
http://journals.plos.org/plosone/article?id=10.1371/journal.pone.0145857
http://bioinformatics.oxfordjournals.org/content/29/19/2494
http://nar.oxfordjournals.org/content/early/2013/11/23/nar.gkt1164.abstract#!

Related work:
http://exolocator.bii.a-star.edu.sg/

NEW:
SW# web edition:
http://swsharp.zesoi.fer.hr/

Free download Web app or web tool SW# from RedcoolMedia.net